Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs112978626 chr21:44251944 A/G 0.000171 286 25.53 43.53 13.07 KM Plot
KIRP rs113011786 chr12:49774966 G/A 3.95E-6 285 25.6 39.53 10.97 KM Plot
KIRP rs113047116 chr12:49928238 C/G 5.87E-6 282 25.62 39.53 10.97 KM Plot
KIRP rs1130603 chr15:64418397 G/A 0.000113 287 18.03 24.8 28.05 KM Plot
KIRP rs113071723 chr12:49873869 C/T 4.13E-6 286 25.53 39.53 10.97 KM Plot
KIRP rs1131430 chr10:124806770 A/G 2.1E-9 286 25.62 26.47 13.17 KM Plot
KIRP rs113178316 chr17:10222699 G/C 1.42E-5 286 26.28 25.75 15.53 KM Plot
KIRP rs113253356 chr10:74895426 C/T 9.77E-15 288 26.37 21.97 5.6 KM Plot
KIRP rs113292545 chr21:44315624 C/T 0.000157 287 25.57 43.53 13.07 KM Plot
KIRP rs113304251 chr10:88285468 G/A 3.36E-7 283 26.37 22.57 9.77 KM Plot
KIRP rs113337140 chr12:49809257 T/A 3.77E-6 287 25.58 37.25 10.97 KM Plot
KIRP rs113364766 chr16:3654067 G/C 0.000126 283 26.1 22.02 19.9 KM Plot
KIRP rs113398998 chr10:43391579 C/T 5.74E-6 286 25.82 24.57 16.12 KM Plot
KIRP rs113410541 chr21:44261530 G/A 0.000171 286 25.53 43.53 13.07 KM Plot
KIRP rs113417819 chr21:44237351 C/T 0.000169 288 25.53 43.53 13.07 KM Plot